Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: J2RRRTNJ01R Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,598,325 sequences; 1,936,637,282 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= gi|1006832|gb|U35064.1|OTU35064 Oncorhynchus tschawytscha heat shock protein 70 (HSP70) mRNA, complete cds Length=2122
Score E Sequences producing significant alignments: (Bits) Value sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) >gb|A... 1197 0.0 dbj|BAD83575.1| heat shock 70kDa protein [Oncorhynchus mykiss] 1189 0.0 dbj|BAD83574.1| heat shock 70kDa protein [Oncorhynchus mykiss] 1181 0.0 dbj|BAB72233.1| stress protein HSP70 [Oncorhynchus mykiss] 1178 0.0 gb|AAH56709.1| Hsp70 protein [Danio rerio] 1095 0.0 ref|XP_001331406.1| PREDICTED: hypothetical protein [Danio rerio 1093 0.0 ref|XP_001332620.1| PREDICTED: similar to Hsp70 protein isofo... 1093 0.0 emb|CAA04673.1| heat shock protein 70 [Oreochromis mossambicus] 1076 0.0 ref|NP_571472.1| heat shock cognate 70-kd protein [Danio reri... 1075 0.0 sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) >... 1065 0.0 gb|ABB17042.1| heat shock protein 70 isoform 2 [Fundulus hete... 1064 0.0 gb|AAX07834.1| HSP70 [Acanthopagrus schlegelii] 1062 0.0 gb|AAR97294.1| inducible heat shock protein 70 [Rhabdosargus sar 1054 0.0 gb|ABB17041.1| heat shock protein 70 isoform 1 [Fundulus hete... 1052 0.0 dbj|BAB72170.1| stress protein HSP70 [Danio rerio] 1052 0.0 ref|XP_698050.1| PREDICTED: similar to Hsp70 protein [Danio reri 1051 0.0 gb|AAR01102.2| HSP70 [Dicentrarchus labrax] 1051 0.0 ref|NP_001093532.1| hypothetical protein LOC798846 [Danio rer... 1050 0.0 dbj|BAC67184.1| heat shock protein 70 kDa [Carassius auratus] 1050 0.0 ref|NP_001098384.1| heat shock protein 70 isoform 5 [Oryzias ... 1045 0.0 emb|CAA69894.1| 70kD heat shock protein [Takifugu rubripes] 1045 0.0 dbj|BAB72168.1| stress protein HSP70-2 [Xiphophorus maculatus] 1043 0.0 dbj|BAB72167.1| stress protein HSP70-1 [Xiphophorus maculatus] 1042 0.0 dbj|BAB88643.1| platyfish HSP70-1 with S-tag [Cloning vector pST 1041 0.0 gb|AAM81603.1| heat shock protein Hsp70 [Cyprinus carpio] 1039 0.0 dbj|BAA31697.1| HSP70 [Paralichthys olivaceus] 1039 0.0 gb|ABG56390.1| inducible heat shock protein 70 [Paralichthys oli 1038 0.0 gb|AAH78115.1| Unknown (protein for MGC:83630) [Xenopus laevis] 1036 0.0 ref|XP_001368952.1| PREDICTED: similar to heat shock-induced ... 1034 0.0 dbj|BAD12572.1| heat shock protein [Numida meleagris] >dbj|BA... 1033 0.0 dbj|BAE30058.1| unnamed protein product [Mus musculus] 1032 0.0 ref|XP_001510947.1| PREDICTED: similar to heat shock protein ... 1032 0.0 dbj|BAE40342.1| unnamed protein product [Mus musculus] 1032 0.0 ref|NP_077327.1| heat shock protein 8 [Rattus norvegicus] >re... 1032 0.0 gb|AAO43731.1| heat shock cognate 70 kDa protein [Carassius aura 1031 0.0 dbj|BAE28187.1| unnamed protein product [Mus musculus] 1031 0.0 dbj|BAE41082.1| unnamed protein product [Mus musculus] 1031 0.0 sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70) >emb|... 1031 0.0 ref|XP_692936.1| PREDICTED: similar to Heat shock protein 8 [... 1031 0.0 dbj|BAE30272.1| unnamed protein product [Mus musculus] >dbj|B... 1031 0.0 sp|Q5NVM9|HSP7C_PONPY Heat shock cognate 71 kDa protein (Heat sh 1031 0.0 ref|XP_001380093.1| PREDICTED: similar to heat shock protein ... 1031 0.0 ref|XP_001370509.1| PREDICTED: similar to heat shock protein ... 1031 0.0 ref|NP_006588.1| heat shock 70kDa protein 8 isoform 1 [Homo s... 1031 0.0 ref|XP_001368926.1| PREDICTED: hypothetical protein [Monodelphis 1030 0.0 gb|AAH66191.1| Heat shock protein 8 [Mus musculus] 1030 0.0 dbj|BAE37572.1| unnamed protein product [Mus musculus] 1030 0.0 dbj|BAE34215.1| unnamed protein product [Mus musculus] 1030 0.0 dbj|BAE37056.1| unnamed protein product [Mus musculus] 1030 0.0 emb|CAI29634.1| hypothetical protein [Pongo pygmaeus] 1030 0.0 gb|AAA37869.1| heat shock protein 70 cognate >gb|AAB18391.1| ... 1030 0.0 dbj|BAE30707.1| unnamed protein product [Mus musculus] 1030 0.0 dbj|BAE30081.1| unnamed protein product [Mus musculus] >dbj|B... 1030 0.0 sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat... 1029 0.0 dbj|BAD96505.1| heat shock 70kDa protein 8 isoform 1 variant [Ho 1029 0.0 dbj|BAE31432.1| unnamed protein product [Mus musculus] >dbj|B... 1029 0.0 dbj|BAE31664.1| unnamed protein product [Mus musculus] 1029 0.0 gb|ABN79589.1| heat shock protein 70 cognate [Silurus meridional 1028 0.0 dbj|BAE30654.1| unnamed protein product [Mus musculus] 1028 0.0 ref|NP_776770.2| heat shock 70kDa protein 8 [Bos taurus] >gb|... 1028 0.0 dbj|BAE41246.1| unnamed protein product [Mus musculus] 1028 0.0 pir||S31716 dnaK-type molecular chaperone hsp72-ps1 - rat >em... 1028 0.0 emb|CAA37823.1| unnamed protein product [Bos taurus] >emb|CAA... 1028 0.0 ref|NP_001072429.1| heat shock 70kDa protein 1-like [Xenopus ... 1027 0.0 ref|NP_571476.1| heat shock protein 8 [Danio rerio] >gb|AAQ97... 1027 0.0 gb|AAH45841.1| Heat shock protein 8 [Danio rerio] 1027 0.0 emb|CAH93238.1| hypothetical protein [Pongo pygmaeus] 1026 0.0 gb|ABS53145.1| heat shock protein 70 [Latimeria menadoensis] 1026 0.0 sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat... 1026 0.0 ref|NP_997669.1| heat shock 70kD protein 1B [Rattus norvegicu... 1026 0.0 gb|ABB17040.1| heat shock cognate 70 [Fundulus heteroclitus macr 1025 0.0 ref|XP_001055808.1| PREDICTED: similar to heat shock protein 8 [ 1025 0.0 ref|NP_001080068.1| Heat shock cognate protein 70 [Xenopus la... 1025 0.0 ref|NP_001079632.1| similar to Heat shock cognate protein 70 ... 1025 0.0 gb|AAK31583.1| heat shock protein 70 [Ambystoma mexicanum] 1025 0.0 ref|NP_034609.2| heat shock 70kDa protein 1A [Mus musculus] >... 1025 0.0 dbj|BAE42680.1| unnamed protein product [Mus musculus] 1024 0.0 ref|XP_001341446.1| PREDICTED: similar to Hsp70 protein [Danio r 1024 0.0 gb|AAH54782.1| Heat shock protein 1A [Mus musculus] 1023 0.0 gb|AAH77998.1| Unknown (protein for MGC:82390) [Xenopus laevis] 1023 0.0 ref|NP_114177.1| heat shock 70kD protein 1A [Rattus norvegicu... 1022 0.0 gb|AAA57233.1| hsp70A1 1022 0.0 ref|NP_034608.2| heat shock 70kDa protein 1B [Mus musculus] >... 1021 0.0 ref|NP_998931.1| heat shock protein 70.2 [Sus scrofa] >sp|Q6S... 1020 0.0 ref|XP_001491933.1| PREDICTED: similar to heat shock protein ... 1020 0.0 sp|Q27965|HS70B_BOVIN Heat shock 70 kDa protein 1B (HSP70.2) ... 1019 0.0 sp|Q27975|HS70A_BOVIN Heat shock 70 kDa protein 1A (HSP70.1) ... 1019 0.0 sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein >gb|A... 1019 0.0 ref|NP_956908.1| hypothetical protein LOC393586 [Danio rerio]... 1019 0.0 sp|Q7YQC6|HSP71_CANFA Heat shock 70 kDa protein 1 >dbj|BAC793... 1019 0.0 emb|CAA52328.1| heat shock protein 70 [Rattus norvegicus] >pr... 1019 0.0 ref|NP_990334.1| heat shock 70kDa protein 8 [Gallus gallus] >... 1019 0.0 sp|Q4U0F3|HS70B_BOSMU Heat shock 70 kDa protein 1B (HSP70.2) ... 1018 0.0 gb|AAS46619.1| heat shock cognate 70 kDa protein [Pimephales pro 1018 0.0 ref|NP_976067.2| heat shock 70kDa protein 1B [Bos taurus] >gb... 1018 0.0 gb|AAP68770.1| heat shock cognate 71 [Kryptolebias marmoratus] 1017 0.0 gb|AAX43782.1| heat shock 70kDa protein 1A [synthetic construct] 1017 0.0 gb|AAT75223.1| heat shock protein 70 kDa [Bos taurus] 1017 0.0 dbj|BAD05136.1| hsc71 [Paralichthys olivaceus] 1017 0.0 sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1) (... 1017 0.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 26, 2007 5:57 PM Number of letters in database: 1,914,080,230 Number of sequences in database: 5,526,899 Lambda K H 0.317 0.134 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 5526899 Number of Hits to DB: 361630166 Number of extensions: 8596087 Number of successful extensions: 29317 Number of sequences better than 10: 253 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 28463 Number of HSP's successfully gapped: 263 Length of query: 2122 Length of database: 1914080230 Length adjustment: 140 Effective length of query: 1982 Effective length of database: 1140314370 Effective search space: 2260103081340 Effective search space used: 646558247790 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 82 (36.2 bits)